Academic research publications spanning genetics, computational biology, and machine learning.
2023 · Nature Immunology
Discovery that apolipoprotein C3 induces inflammasome activation specifically in its delipidated form, revealing new insights into inflammatory mechanisms in cardiovascular disease.
2022 · Proceedings of the National Academy of Sciences
Large-scale functional characterization of OCTN2 variants enabling development of a protein-specific variant effect predictor for Carnitine Transporter Deficiency.
2021 · Pacific Symposium on Biocomputing
Analysis of drug response pharmacogenetics across 200,000 UK Biobank participants, examining the genetic basis of variation in drug efficacy and adverse reactions.
2021 · Clinical Pharmacology & Therapeutics
A review of genome-wide association study approaches in pharmacogenomics, examining how GWAS has advanced our understanding of genetic influences on drug response.
2021 · American Journal of Human Genetics
A comprehensive review examining the opportunities and challenges in interpreting rare genetic variants in clinically important genes, with implications for precision medicine.
2020 · medRxiv
A machine learning system for real-time triage and processing of COVID-19 case report faxes, developed to support public health response during the pandemic.
2020 · PLoS Computational Biology
A transfer learning approach for predicting the functional impact of CYP2D6 haplotypes, a key pharmacogene affecting drug metabolism for many commonly prescribed medications.
2020 · American Journal of Human Genetics
An assessment of how digital phenotyping approaches can enhance genetic studies of human diseases by improving phenotype definitions and discovery power.
2020 · Clinical Pharmacology & Therapeutics
A comprehensive population-scale analysis of pharmacogenetic variation in the UK Biobank, characterizing the distribution of clinically actionable pharmacogenetic variants.
2020 · bioRxiv
Identifying genetic factors, including LPA and APOE variants, that are associated with statin drug selection patterns in the UK Biobank population.
2020 · ChemRxiv
Computational identification of candidate drugs that may inhibit SARS-CoV-2 cell entry through homology modeling of the TMPRSS2 protease.
2019 · Bioinformatics
A web-based platform for browsing and exploring genotype-phenotype associations from biobank-scale summary statistics, enabling accessible exploration of genetic associations.
2019 · Human Mutation
Computational approaches for predicting venous thromboembolism risk from exome sequencing data, developed as part of the Critical Assessment of Genome Interpretation (CAGI) community challenge.
2018 · Human Molecular Genetics
A review exploring how large-scale genomic data is transforming pharmacogenomics research and its translation from laboratory discoveries to clinical practice.
2018 · Nature Communications
A comprehensive analysis of protein-truncating variants across over 337,000 UK Biobank participants, revealing medically relevant genetic variation at population scale.
2017 · Bioinformatics
A scalable cloud-based platform enabling interactive analysis of terabyte-scale genomic variant datasets, demonstrating practical approaches for big data genomics.